Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898768.1_cds_XP_016448757.1_43378
CDS Infomation

[gene=LOC107773845] [db_xref=GeneID:107773845] [protein=UPF0061 protein azo1574-like] [protein_id=XP_016448757.1] [location=join(817..1146,2223..2332,2422..2478,2560..2859,3172..3419,3717..4023,4135..4408,4550..4804)] [gbkey=CDS]
Sequence

ATGCTTTCCCACATTTCAGCTTCACTCTCTCACACCTCTTCCACCACCACCGCTTCCTTC
CTCCTCCGCCGCGGCCCATCTCTTCGACCCAAATTCCCTTTTTGCCCTTACAAACCCTCC
AAATTTCAAAAACAACACCGTTTTGTGTTTTCTTCAATGGACTCAGCTGCCACTGTTGAT
TCAGTTGCTAATGATTTAAAGAAACAAAGCTTAAAAGGAACTGAAAATGTTGATATTAGT
AGTAAATTGAATATTGAAGAGCTTAATTGGGATAATTCTTTCGTTCGTGAATTGCCTGGT
GATCCCAGAAGTGATAGTATTCCAAGAGAGGTGTTGCATGCTTGCTACACAAAAGTGTTA
CCCTCTGTAAAGGTTGATAACCCTCAGCTTGTAGCATGGTCAGAATCAGTGGCGGAGTTA
CTCGAATTGGATCCCAAAGAATTTGAGAGGCCTGATTTTCCCTTTATATTCTCGGGGGCA
TCACCATTAGTGGGAGCGATGCCTTATGCCCAAAATTATGGCGGACATCAGTTCGGCATG
TGGGCCGGTCAGTTAGGGGATGGTAGGGCGATAACTCTTGGAGAGATTTTGAATTCGAAG
TCTCAAAGGTGGGAGCTGCAACTGAAGGGTGCTGGAAAGACCCCATATAGTCGTTTTGCT
GATGGTCTTGCAGTGCTTCGTAGCAGCATTCGGGAATTCCTTTGCAGCGAAGCAATGCAT
AGTCTTGGAATCCCAACAACACGAGCACTTTGTCTAGTGACGACAGGAAAAGATGTCCTG
AGGGATATGTTTTACGACGGAAATCCCAAAGATGAGCCTGGTGCAATTGTCTGCAGAGTT
GCCCAATCCTTCCTGCGTTTTGGTTCTTATCAGCTACATGCCTCCAGAGGTAAAAAGGAT
CTTGAGATTGTCCGTGCTTTGGCAGACTACGCCATTAGATATCACTTCCCCCATTTGGAG
AACATGACTAGGAGTGGAAGTATATCATTCAACACTGGTGAGGAAGACAATTCAGCTGTG
GATTTAACTACAAACAAGTATGCAGCATGGGCAGTGGAAGTCGCTGAGCGAACCGCTTCA
ATGATTGCCAGGTGGCAGGGTGTTGGTTTCACACATGGAGTGATGAACACTGATAACATG
AGCGTGTTAGGACTCACCATCGACTATGGCCCTTTTGGATTTTTAGATGCTTTTGATCCC
AGTTTCACACCAAATACCACTGATCTTCCTGGCAGAAGATACTGTTTTGCAAATCAGCCA
GATGTGGGTTTATGGAATATTGCACAGTTTACCTCTGCTCTATCTACTGCGGAGTTGCTA
AATGATAAGGAGGCTGATTATGCCATGGAAAGTTATGGCAACAAATTTATGGATGATTAC
CAAGCTATCATGACCAGAAAACTTGGTCTGGCAAAGTACAATAAAAAGTTGATTGGTGAA
CTACTCAAGAATATGGCCATTGATAAAGTTGATTATACAAATTTCTTTCGATTGCTATCA
AACATCAAAGCTGATCCTACAATTCCAGAGGACCAGTTATTGATTCCTCTTAAAGCTGTT
CTCTTGGATATTGGCGAGGAACGCAAGGAAGCCTGGGCAAGCTGGGTAAAGGCTTACATA
CAAGAGCTCTCTACAACTGGTGTTTCCGACGAGGAGAGGAAGGTTTCGATGAATTCTGTA
AATCCAAAGTACATACTTAGAAACTATTTATGCCAGACTGCTATTGATGTAGCAGAACAA
GGCGATTTTGGGGAGGTTCGGCAGCTATTAAAGGTAATGCAATGCCCATTTGATGAACAA
CCGGGTATGGAGAAGTACACACGGTTGCCTCCAGCTTGGGCCTATCGTCCGGGTGTATGC
ATGCTTTCTTGTTCTTCATAA

Peptide Sequence

PEP ID

XP_016448757.1
PEP Infomation

PREDICTED: UPF0061 protein azo1574-like [Nicotiana tabacum]
Sequence

MLSHISASLSHTSSTTTASFLLRRGPSLRPKFPFCPYKPSKFQKQHRFVFSSMDSAATVD
SVANDLKKQSLKGTENVDISSKLNIEELNWDNSFVRELPGDPRSDSIPREVLHACYTKVL
PSVKVDNPQLVAWSESVAELLELDPKEFERPDFPFIFSGASPLVGAMPYAQNYGGHQFGM
WAGQLGDGRAITLGEILNSKSQRWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMH
SLGIPTTRALCLVTTGKDVLRDMFYDGNPKDEPGAIVCRVAQSFLRFGSYQLHASRGKKD
LEIVRALADYAIRYHFPHLENMTRSGSISFNTGEEDNSAVDLTTNKYAAWAVEVAERTAS
MIARWQGVGFTHGVMNTDNMSVLGLTIDYGPFGFLDAFDPSFTPNTTDLPGRRYCFANQP
DVGLWNIAQFTSALSTAELLNDKEADYAMESYGNKFMDDYQAIMTRKLGLAKYNKKLIGE
LLKNMAIDKVDYTNFFRLLSNIKADPTIPEDQLLIPLKAVLLDIGEERKEAWASWVKAYI
QELSTTGVSDEERKVSMNSVNPKYILRNYLCQTAIDVAEQGDFGEVRQLLKVMQCPFDEQ
PGMEKYTRLPPAWAYRPGVCMLSCSS

Transcript Sequence

Gene sequence data has not been registered.